3.2.17 Thermodynamics

  • In order to view the thermodynamics parameters of a chosen DNA/RNA part in vector NTI you should first select the requested part and then go to “Analysis” in the main menu and choose “Thermodynamic Properties” (Figure 3.2.17.1). The “Oligo Analysis” dialog will open to display the results (Figure 3.2.17.2).


    Figure 3.2.17.1: Opening Thermodynamics properties in Vector NTI.

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    Figure 3.2.17.2: "Oligo analysis" dialog in Vector NTI.

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  • In Genome Compiler when you choose to view a single project at the top right (Figure 3.2.17.3), for each part you select in the project the appropriate DNA/RNA thermodynamics as well as protein parameters will be automatically displayed on the bottom of the screen (Figure 3.2.17.4).


    Figure 3.2.17.3: “Single project view” in Genome Compiler.

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    Figure 3.2.17.4: DNA/RNA thermodynamics as well as protein parameters display is Genome Compiler.

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